Detailed information of SNP:
|
SNP ID:
sf0715911870(Gbrowse)
Chromosome: chr07 Position: 15911870 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1397 | 90.34% | 9.66% |
| All Indica | 796 | 98.62% | 1.38% |
| All Japonica | 479 | 77.04% | 22.96% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 374 | 99.73% | 0.27% |
| Indica II | 212 | 99.53% | 0.47% |
| Indica Intermediate | 210 | 95.71% | 4.29% |
| Temperate Japonica | 322 | 88.20% | 11.80% |
| Tropical Japonica | 89 | 35.96% | 64.04% |
| Japonica Intermediate | 68 | 77.94% | 22.06% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 41 | 87.80% | 12.20% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0715911870 | G->A | INTERGENIC | None |