Detailed information of SNP:
|
SNP ID:
sf0717124736(Gbrowse)
Chromosome: chr07 Position: 17124736 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 58.22% | 41.78% |
| All Indica | 798 | 35.09% | 64.91% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 25.37% | 74.63% |
| Indica I | 375 | 49.60% | 50.40% |
| Indica II | 213 | 3.76% | 96.24% |
| Indica Intermediate | 210 | 40.95% | 59.05% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 48.78% | 51.22% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0717124736 | G->A | INTERGENIC | None |