Detailed information of SNP:



SNP ID: sf0717196108(Gbrowse)

Chromosome: chr07

Position: 17196108
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1418 55.99% 44.01%
All Indica799 93.99% 6.01%
All Japonica497 2.21% 97.79%
Aus66 10.61% 89.39%
Indica I375 95.73% 4.27%
Indica II213 98.12% 1.88%
Indica Intermediate211 86.73% 13.27%
Temperate Japonica335 1.49% 98.51%
Tropical Japonica94 4.26% 95.74%
Japonica Intermediate68 2.94% 97.06%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 59.52% 40.48%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0717196108 G->A INTERGENIC None