Detailed information of SNP:



SNP ID: sf0717283823(Gbrowse)

Chromosome: chr07

Position: 17283823
Major allele: A

Minor allele: G

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of A(major allele)Frequency of G(minor allele)
All1417 58.22% 41.78%
All Indica799 97.50% 2.50%
All Japonica497 2.21% 97.79%
Aus67 20.90% 79.10%
Indica I375 100.00% 0.00%
Indica II213 98.12% 1.88%
Indica Intermediate211 92.42% 7.58%
Temperate Japonica335 1.49% 98.51%
Tropical Japonica94 4.26% 95.74%
Japonica Intermediate68 2.94% 97.06%
Group VI/Aromatic14 0.00% 100.00%
Intermediate40 52.50% 47.50%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0717283823 G->A INTERGENIC None