Detailed information of SNP:
|
SNP ID:
sf0718143121(Gbrowse)
Chromosome: chr07 Position: 18143121 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 51.06% | 48.94% |
| All Indica | 794 | 56.30% | 43.70% |
| All Japonica | 495 | 38.38% | 61.62% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 371 | 71.43% | 28.57% |
| Indica II | 212 | 24.06% | 75.94% |
| Indica Intermediate | 211 | 62.09% | 37.91% |
| Temperate Japonica | 334 | 33.83% | 66.17% |
| Tropical Japonica | 93 | 61.29% | 38.71% |
| Japonica Intermediate | 68 | 29.41% | 70.59% |
| Group VI/Aromatic | 14 | 21.43% | 78.57% |
| Intermediate | 42 | 33.33% | 66.67% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718143121 | A->G | INTERGENIC | None |