Detailed information of SNP:
|
SNP ID:
sf0718792119(Gbrowse)
Chromosome: chr07 Position: 18792119 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1400 | 92.64% | 7.36% |
| All Indica | 798 | 99.12% | 0.88% |
| All Japonica | 479 | 81.84% | 18.16% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 375 | 100.00% | 0.00% |
| Indica II | 213 | 97.65% | 2.35% |
| Indica Intermediate | 210 | 99.05% | 0.95% |
| Temperate Japonica | 334 | 97.90% | 2.10% |
| Tropical Japonica | 85 | 29.41% | 70.59% |
| Japonica Intermediate | 60 | 66.67% | 33.33% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718792119 | G->A | INTERGENIC | None |