Detailed information of SNP:



SNP ID: sf0718884479(Gbrowse)

Chromosome: chr07

Position: 18884479
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 96.34% 3.66%
All Indica799 94.37% 5.63%
All Japonica497 100.00% 0.00%
Aus67 94.03% 5.97%
Indica I375 98.67% 1.33%
Indica II213 92.96% 7.04%
Indica Intermediate211 88.15% 11.85%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0718884479 C->T INTERGENIC None