Detailed information of SNP:
|
SNP ID:
sf0718903848(Gbrowse)
Chromosome: chr07 Position: 18903848 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 59.51% | 40.49% |
| All Indica | 798 | 89.47% | 10.53% |
| All Japonica | 494 | 4.45% | 95.55% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 98.40% | 1.60% |
| Indica II | 213 | 92.49% | 7.51% |
| Indica Intermediate | 211 | 70.62% | 29.38% |
| Temperate Japonica | 334 | 5.09% | 94.91% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 66 | 7.58% | 92.42% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 61.90% | 38.10% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718903848 | A->G | INTERGENIC | None |