Detailed information of SNP:
|
SNP ID:
sf0718921672(Gbrowse)
Chromosome: chr07 Position: 18921672 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 66.01% | 33.99% |
| All Indica | 795 | 64.28% | 35.72% |
| All Japonica | 497 | 76.86% | 23.14% |
| Aus | 67 | 29.85% | 70.15% |
| Indica I | 374 | 78.34% | 21.66% |
| Indica II | 211 | 28.91% | 71.09% |
| Indica Intermediate | 210 | 74.76% | 25.24% |
| Temperate Japonica | 335 | 96.12% | 3.88% |
| Tropical Japonica | 94 | 24.47% | 75.53% |
| Japonica Intermediate | 68 | 54.41% | 45.59% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 47.62% | 52.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718921672 | G->A | INTERGENIC | None |