Detailed information of SNP:
|
SNP ID:
sf0718981418(Gbrowse)
Chromosome: chr07 Position: 18981418 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1350 | 82.37% | 17.63% |
| All Indica | 734 | 69.89% | 30.11% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 66 | 83.33% | 16.67% |
| Indica I | 322 | 54.97% | 45.03% |
| Indica II | 206 | 85.92% | 14.08% |
| Indica Intermediate | 206 | 77.18% | 22.82% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 84.62% | 15.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718981418 | G->A | INTERGENIC | None |