Detailed information of SNP:
|
SNP ID:
sf0718992990(Gbrowse)
Chromosome: chr07 Position: 18992990 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 96.10% | 3.90% |
| All Indica | 793 | 95.21% | 4.79% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 79.10% | 20.90% |
| Indica I | 373 | 96.51% | 3.49% |
| Indica II | 212 | 96.70% | 3.30% |
| Indica Intermediate | 208 | 91.35% | 8.65% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718992990 | G->A | INTERGENIC | None |