Detailed information of SNP:
|
SNP ID:
sf0718993748(Gbrowse)
Chromosome: chr07 Position: 18993748 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1408 | 95.24% | 4.76% |
| All Indica | 793 | 93.82% | 6.18% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 64 | 79.69% | 20.31% |
| Indica I | 373 | 93.57% | 6.43% |
| Indica II | 211 | 96.21% | 3.79% |
| Indica Intermediate | 209 | 91.87% | 8.13% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 40 | 90.00% | 10.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718993748 | G->A | INTERGENIC | None |