Detailed information of SNP:
|
SNP ID:
sf0718995084(Gbrowse)
Chromosome: chr07 Position: 18995084 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1412 | 90.37% | 9.63% |
| All Indica | 794 | 92.44% | 7.56% |
| All Japonica | 497 | 99.20% | 0.80% |
| Aus | 65 | 13.85% | 86.15% |
| Indica I | 371 | 92.72% | 7.28% |
| Indica II | 213 | 95.77% | 4.23% |
| Indica Intermediate | 210 | 88.57% | 11.43% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 94.12% | 5.88% |
| Group VI/Aromatic | 14 | 14.29% | 85.71% |
| Intermediate | 42 | 90.48% | 9.52% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718995084 | G->A | INTERGENIC | None |