Detailed information of SNP:
|
SNP ID:
sf0718997490(Gbrowse)
Chromosome: chr07 Position: 18997490 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1414 | 95.33% | 4.67% |
| All Indica | 795 | 94.34% | 5.66% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 76.12% | 23.88% |
| Indica I | 374 | 95.45% | 4.55% |
| Indica II | 213 | 95.77% | 4.23% |
| Indica Intermediate | 208 | 90.87% | 9.13% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 92.68% | 7.32% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0718997490 | A->G | INTERGENIC | None |