Detailed information of SNP:



SNP ID: sf0719004372(Gbrowse)

Chromosome: chr07

Position: 19004372
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1414 71.15% 28.85%
All Indica794 97.48% 2.52%
All Japonica497 23.94% 76.06%
Aus67 98.51% 1.49%
Indica I375 98.13% 1.87%
Indica II213 99.53% 0.47%
Indica Intermediate206 94.17% 5.83%
Temperate Japonica335 6.87% 93.13%
Tropical Japonica94 73.40% 26.60%
Japonica Intermediate68 39.71% 60.29%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719004372 A->G INTERGENIC None