Detailed information of SNP:



SNP ID: sf0719017490(Gbrowse)

Chromosome: chr07

Position: 19017490
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1409 62.24% 37.76%
All Indica790 87.72% 12.28%
All Japonica496 16.13% 83.87%
Aus67 85.07% 14.93%
Indica I371 85.44% 14.56%
Indica II211 90.05% 9.95%
Indica Intermediate208 89.42% 10.58%
Temperate Japonica335 2.39% 97.61%
Tropical Japonica93 58.06% 41.94%
Japonica Intermediate68 26.47% 73.53%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 80.95% 19.05%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719017490 A->G INTERGENIC None