Detailed information of SNP:



SNP ID: sf0719041216(Gbrowse)

Chromosome: chr07

Position: 19041216
Major allele: G

Minor allele: A

Reference allele: A

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1409 51.31% 48.69%
All Indica798 83.46% 16.54%
All Japonica488 6.97% 93.03%
Aus67 1.49% 98.51%
Indica I374 89.84% 10.16%
Indica II213 94.37% 5.63%
Indica Intermediate211 61.14% 38.86%
Temperate Japonica326 1.53% 98.47%
Tropical Japonica94 28.72% 71.28%
Japonica Intermediate68 2.94% 97.06%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 52.38% 47.62%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719041216 A->G INTERGENIC None