Detailed information of SNP:



SNP ID: sf0719043640(Gbrowse)

Chromosome: chr07

Position: 19043640
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1418 51.69% 48.31%
All Indica799 16.90% 83.10%
All Japonica497 99.40% 0.60%
Aus67 100.00% 0.00%
Indica I375 9.87% 90.13%
Indica II213 7.98% 92.02%
Indica Intermediate211 38.39% 61.61%
Temperate Japonica335 99.70% 0.30%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 98.53% 1.47%
Group VI/Aromatic14 100.00% 0.00%
Intermediate41 56.10% 43.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719043640 C->T INTERGENIC None