Detailed information of SNP:
|
SNP ID:
sf0719049783(Gbrowse)
Chromosome: chr07 Position: 19049783 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1398 | 93.13% | 6.87% |
| All Indica | 783 | 90.42% | 9.58% |
| All Japonica | 495 | 97.78% | 2.22% |
| Aus | 65 | 87.69% | 12.31% |
| Indica I | 367 | 96.73% | 3.27% |
| Indica II | 211 | 98.10% | 1.90% |
| Indica Intermediate | 205 | 71.22% | 28.78% |
| Temperate Japonica | 335 | 96.72% | 3.28% |
| Tropical Japonica | 92 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 95.12% | 4.88% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719049783 | G->A | INTERGENIC | None |