Detailed information of SNP:
|
SNP ID:
sf0719056987(Gbrowse)
Chromosome: chr07 Position: 19056987 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1419 | 88.58% | 11.42% |
| All Indica | 799 | 87.23% | 12.77% |
| All Japonica | 497 | 91.95% | 8.05% |
| Aus | 67 | 79.10% | 20.90% |
| Indica I | 375 | 94.40% | 5.60% |
| Indica II | 213 | 93.90% | 6.10% |
| Indica Intermediate | 211 | 67.77% | 32.23% |
| Temperate Japonica | 335 | 96.42% | 3.58% |
| Tropical Japonica | 94 | 71.28% | 28.72% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719056987 | G->A | INTERGENIC | None |