Detailed information of SNP:



SNP ID: sf0719078060(Gbrowse)

Chromosome: chr07

Position: 19078060
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1419 89.85% 10.15%
All Indica799 99.75% 0.25%
All Japonica497 85.11% 14.89%
Aus67 26.87% 73.13%
Indica I375 100.00% 0.00%
Indica II213 100.00% 0.00%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 97.61% 2.39%
Tropical Japonica94 56.38% 43.62%
Japonica Intermediate68 63.24% 36.76%
Group VI/Aromatic14 7.14% 92.86%
Intermediate42 85.71% 14.29%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719078060 C->T INTERGENIC None