Detailed information of SNP:
|
SNP ID:
sf0719194011(Gbrowse)
Chromosome: chr07 Position: 19194011 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1418 | 80.82% | 19.18% |
| All Indica | 799 | 90.11% | 9.89% |
| All Japonica | 497 | 80.28% | 19.72% |
| Aus | 67 | 0.00% | 100.00% |
| Indica I | 375 | 94.67% | 5.33% |
| Indica II | 213 | 97.65% | 2.35% |
| Indica Intermediate | 211 | 74.41% | 25.59% |
| Temperate Japonica | 335 | 97.91% | 2.09% |
| Tropical Japonica | 94 | 26.60% | 73.40% |
| Japonica Intermediate | 68 | 67.65% | 32.35% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 41 | 65.85% | 34.15% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719194011 | A->G | INTERGENIC | None |