Detailed information of SNP:



SNP ID: sf0719201663(Gbrowse)

Chromosome: chr07

Position: 19201663
Major allele: G

Minor allele: C

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of C(minor allele)
All1417 66.97% 33.03%
All Indica797 92.97% 7.03%
All Japonica497 20.12% 79.88%
Aus67 98.51% 1.49%
Indica I374 96.52% 3.48%
Indica II213 93.90% 6.10%
Indica Intermediate210 85.71% 14.29%
Temperate Japonica335 2.69% 97.31%
Tropical Japonica94 73.40% 26.60%
Japonica Intermediate68 32.35% 67.65%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 66.67% 33.33%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719201663 C->G INTERGENIC None