Detailed information of SNP:
|
SNP ID:
sf0719270361(Gbrowse)
Chromosome: chr07 Position: 19270361 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1415 | 93.07% | 6.93% |
| All Indica | 796 | 90.08% | 9.92% |
| All Japonica | 496 | 100.00% | 0.00% |
| Aus | 67 | 76.12% | 23.88% |
| Indica I | 374 | 94.65% | 5.35% |
| Indica II | 212 | 99.53% | 0.47% |
| Indica Intermediate | 210 | 72.38% | 27.62% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 93 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719270361 | G->A | INTERGENIC | None |