Detailed information of SNP:
|
SNP ID:
sf0719333710(Gbrowse)
Chromosome: chr07 Position: 19333710 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 92.31% | 7.69% |
| All Indica | 797 | 88.71% | 11.29% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 74.63% | 25.37% |
| Indica I | 374 | 92.51% | 7.49% |
| Indica II | 213 | 97.65% | 2.35% |
| Indica Intermediate | 210 | 72.86% | 27.14% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719333710 | T->G | INTERGENIC | None |