Detailed information of SNP:
|
SNP ID:
sf0719334721(Gbrowse)
Chromosome: chr07 Position: 19334721 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1416 | 86.65% | 13.35% |
| All Indica | 798 | 88.10% | 11.90% |
| All Japonica | 495 | 85.66% | 14.34% |
| Aus | 67 | 76.12% | 23.88% |
| Indica I | 375 | 92.27% | 7.73% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 210 | 71.43% | 28.57% |
| Temperate Japonica | 335 | 97.61% | 2.39% |
| Tropical Japonica | 94 | 53.19% | 46.81% |
| Japonica Intermediate | 66 | 71.21% | 28.79% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 85.71% | 14.29% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719334721 | A->G | INTERGENIC | None |