Detailed information of SNP:
|
SNP ID:
sf0719343796(Gbrowse)
Chromosome: chr07 Position: 19343796 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 90.83% | 9.17% |
| All Indica | 797 | 85.82% | 14.18% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 77.61% | 22.39% |
| Indica I | 374 | 91.18% | 8.82% |
| Indica II | 213 | 93.90% | 6.10% |
| Indica Intermediate | 210 | 68.10% | 31.90% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719343796 | G->A | INTERGENIC | None |