Detailed information of SNP:
|
SNP ID:
sf0719344205(Gbrowse)
Chromosome: chr07 Position: 19344205 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1409 | 81.90% | 18.10% |
| All Indica | 791 | 82.93% | 17.07% |
| All Japonica | 496 | 93.55% | 6.45% |
| Aus | 66 | 0.00% | 100.00% |
| Indica I | 374 | 88.24% | 11.76% |
| Indica II | 212 | 91.98% | 8.02% |
| Indica Intermediate | 205 | 63.90% | 36.10% |
| Temperate Japonica | 334 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 72.34% | 27.66% |
| Japonica Intermediate | 68 | 92.65% | 7.35% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 42 | 80.95% | 19.05% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719344205 | G->A | INTERGENIC | None |