Detailed information of SNP:



SNP ID: sf0719372297(Gbrowse)

Chromosome: chr07

Position: 19372297
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1394 94.76% 5.24%
All Indica797 100.00% 0.00%
All Japonica474 85.65% 14.35%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II211 100.00% 0.00%
Indica Intermediate211 100.00% 0.00%
Temperate Japonica334 98.80% 1.20%
Tropical Japonica74 39.19% 60.81%
Japonica Intermediate66 71.21% 28.79%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 88.10% 11.90%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719372297 C->T INTERGENIC None