Detailed information of SNP:



SNP ID: sf0719450069(Gbrowse)

Chromosome: chr07

Position: 19450069
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 95.91% 4.09%
All Indica799 93.24% 6.76%
All Japonica497 100.00% 0.00%
Aus67 100.00% 0.00%
Indica I375 92.53% 7.47%
Indica II213 94.84% 5.16%
Indica Intermediate211 92.89% 7.11%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate68 100.00% 0.00%
Group VI/Aromatic14 100.00% 0.00%
Intermediate42 90.48% 9.52%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719450069 C->A INTERGENIC None