Detailed information of SNP:



SNP ID: sf0719453323(Gbrowse)

Chromosome: chr07

Position: 19453323
Major allele: T

Minor allele: C

Reference allele: T

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of T(major allele)Frequency of C(minor allele)
All1399 96.78% 3.22%
All Indica797 99.37% 0.63%
All Japonica495 99.80% 0.20%
Aus52 46.15% 53.85%
Indica I374 98.93% 1.07%
Indica II213 100.00% 0.00%
Indica Intermediate210 99.52% 0.48%
Temperate Japonica335 100.00% 0.00%
Tropical Japonica94 100.00% 0.00%
Japonica Intermediate66 98.48% 1.52%
Group VI/Aromatic13 15.38% 84.62%
Intermediate42 100.00% 0.00%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0719453323 T->C INTERGENIC None