Detailed information of SNP:
|
SNP ID:
sf0719453364(Gbrowse)
Chromosome: chr07 Position: 19453364 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1395 | 62.22% | 37.78% |
| All Indica | 779 | 35.17% | 64.83% |
| All Japonica | 497 | 99.40% | 0.60% |
| Aus | 67 | 95.52% | 4.48% |
| Indica I | 364 | 33.24% | 66.76% |
| Indica II | 208 | 21.15% | 78.85% |
| Indica Intermediate | 207 | 52.66% | 47.34% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 38 | 57.89% | 42.11% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719453364 | G->A | INTERGENIC | None |