Detailed information of SNP:
|
SNP ID:
sf0719508699(Gbrowse)
Chromosome: chr07 Position: 19508699 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 93.36% | 6.64% |
| All Indica | 797 | 90.46% | 9.54% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 66 | 78.79% | 21.21% |
| Indica I | 374 | 94.12% | 5.88% |
| Indica II | 213 | 98.12% | 1.88% |
| Indica Intermediate | 210 | 76.19% | 23.81% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719508699 | G->A | INTERGENIC | None |