Detailed information of SNP:
|
SNP ID:
sf0719510495(Gbrowse)
Chromosome: chr07 Position: 19510495 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 88.71% | 11.29% |
| All Indica | 797 | 82.56% | 17.44% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 80.60% | 19.40% |
| Indica I | 374 | 87.43% | 12.57% |
| Indica II | 212 | 87.74% | 12.26% |
| Indica Intermediate | 211 | 68.72% | 31.28% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 88.10% | 11.90% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719510495 | G->A | INTERGENIC | None |