Detailed information of SNP:
|
SNP ID:
sf0719513247(Gbrowse)
Chromosome: chr07 Position: 19513247 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1417 | 62.17% | 37.83% |
| All Indica | 797 | 84.32% | 15.68% |
| All Japonica | 497 | 19.92% | 80.08% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 374 | 91.44% | 8.56% |
| Indica II | 212 | 74.53% | 25.47% |
| Indica Intermediate | 211 | 81.52% | 18.48% |
| Temperate Japonica | 335 | 3.88% | 96.12% |
| Tropical Japonica | 94 | 62.77% | 37.23% |
| Japonica Intermediate | 68 | 39.71% | 60.29% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 69.05% | 30.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719513247 | A->G | INTERGENIC | None |