Detailed information of SNP:
|
SNP ID:
sf0719706318(Gbrowse)
Chromosome: chr07 Position: 19706318 |
Major allele:
A
Minor allele: C Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of C(minor allele) |
|---|---|---|---|
| All | 1412 | 97.03% | 2.97% |
| All Indica | 796 | 98.24% | 1.76% |
| All Japonica | 493 | 94.73% | 5.27% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 374 | 98.13% | 1.87% |
| Indica II | 212 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 96.67% | 3.33% |
| Temperate Japonica | 331 | 92.75% | 7.25% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0719706318 | A->C | INTERGENIC | None |