Detailed information of SNP:
|
SNP ID:
sf0720599662(Gbrowse)
Chromosome: chr07 Position: 20599662 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1392 | 96.19% | 3.81% |
| All Indica | 775 | 93.29% | 6.71% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 368 | 96.47% | 3.53% |
| Indica II | 211 | 97.16% | 2.84% |
| Indica Intermediate | 196 | 83.16% | 16.84% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 39 | 100.00% | 0.00% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0720599662 | G->A | INTERGENIC | None |