Detailed information of SNP:
|
SNP ID:
sf0721014314(Gbrowse)
Chromosome: chr07 Position: 21014314 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1403 | 60.30% | 39.70% |
| All Indica | 785 | 31.59% | 68.41% |
| All Japonica | 497 | 99.60% | 0.40% |
| Aus | 67 | 92.54% | 7.46% |
| Indica I | 367 | 29.43% | 70.57% |
| Indica II | 211 | 33.65% | 66.35% |
| Indica Intermediate | 207 | 33.33% | 66.67% |
| Temperate Japonica | 335 | 99.70% | 0.30% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 98.53% | 1.47% |
| Group VI/Aromatic | 13 | 84.62% | 15.38% |
| Intermediate | 41 | 73.17% | 26.83% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0721014314 | G->A | INTERGENIC | None |