Detailed information of SNP:
|
SNP ID:
sf0721053109(Gbrowse)
Chromosome: chr07 Position: 21053109 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1418 | 61.92% | 38.08% |
| All Indica | 799 | 93.49% | 6.51% |
| All Japonica | 496 | 8.87% | 91.13% |
| Aus | 67 | 88.06% | 11.94% |
| Indica I | 375 | 98.67% | 1.33% |
| Indica II | 213 | 84.51% | 15.49% |
| Indica Intermediate | 211 | 93.36% | 6.64% |
| Temperate Japonica | 335 | 8.36% | 91.64% |
| Tropical Japonica | 93 | 10.75% | 89.25% |
| Japonica Intermediate | 68 | 8.82% | 91.18% |
| Group VI/Aromatic | 14 | 7.14% | 92.86% |
| Intermediate | 42 | 64.29% | 35.71% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0721053109 | A->G | INTERGENIC | None |