Detailed information of SNP:
|
SNP ID:
sf0721064895(Gbrowse)
Chromosome: chr07 Position: 21064895 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 91.74% | 8.26% |
| All Indica | 799 | 98.12% | 1.88% |
| All Japonica | 495 | 89.70% | 10.30% |
| Aus | 66 | 28.79% | 71.21% |
| Indica I | 375 | 97.87% | 2.13% |
| Indica II | 213 | 97.18% | 2.82% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 335 | 99.40% | 0.60% |
| Tropical Japonica | 93 | 49.46% | 50.54% |
| Japonica Intermediate | 67 | 97.01% | 2.99% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 92.86% | 7.14% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0721064895 | G->A | INTERGENIC | None |