Detailed information of SNP:
|
SNP ID:
sf0721455718(Gbrowse)
Chromosome: chr07 Position: 21455718 |
Major allele:
T
Minor allele: G Reference allele: T |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of T(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1417 | 93.37% | 6.63% |
| All Indica | 797 | 91.72% | 8.28% |
| All Japonica | 497 | 95.17% | 4.83% |
| Aus | 67 | 97.01% | 2.99% |
| Indica I | 374 | 88.24% | 11.76% |
| Indica II | 213 | 100.00% | 0.00% |
| Indica Intermediate | 210 | 89.52% | 10.48% |
| Temperate Japonica | 335 | 92.84% | 7.16% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 92.86% | 7.14% |
| Intermediate | 42 | 97.62% | 2.38% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0721455718 | T->G | INTERGENIC | None |