Detailed information of SNP:
|
SNP ID:
sf0721831144(Gbrowse)
Chromosome: chr07 Position: 21831144 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1410 | 94.54% | 5.46% |
| All Indica | 790 | 90.76% | 9.24% |
| All Japonica | 497 | 99.80% | 0.20% |
| Aus | 67 | 98.51% | 1.49% |
| Indica I | 372 | 99.73% | 0.27% |
| Indica II | 209 | 68.90% | 31.10% |
| Indica Intermediate | 209 | 96.65% | 3.35% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 98.94% | 1.06% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 42 | 95.24% | 4.76% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0721831144 | G->A | INTERGENIC | None |