Detailed information of SNP:



SNP ID: sf0722259313(Gbrowse)

Chromosome: chr07

Position: 22259313
Major allele: G

Minor allele: A

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of A(minor allele)
All1419 87.46% 12.54%
All Indica799 98.12% 1.88%
All Japonica497 68.01% 31.99%
Aus67 100.00% 0.00%
Indica I375 100.00% 0.00%
Indica II213 94.37% 5.63%
Indica Intermediate211 98.58% 1.42%
Temperate Japonica335 54.63% 45.37%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 91.18% 8.82%
Group VI/Aromatic14 92.86% 7.14%
Intermediate42 92.86% 7.14%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0722259313 G->A INTERGENIC None