Detailed information of SNP:
|
SNP ID:
sf0723126895(Gbrowse)
Chromosome: chr07 Position: 23126895 |
Major allele:
A
Minor allele: G Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of A(major allele) | Frequency of G(minor allele) |
|---|---|---|---|
| All | 1402 | 95.36% | 4.64% |
| All Indica | 783 | 92.85% | 7.15% |
| All Japonica | 497 | 100.00% | 0.00% |
| Aus | 67 | 100.00% | 0.00% |
| Indica I | 370 | 99.46% | 0.54% |
| Indica II | 213 | 79.34% | 20.66% |
| Indica Intermediate | 200 | 95.00% | 5.00% |
| Temperate Japonica | 335 | 100.00% | 0.00% |
| Tropical Japonica | 94 | 100.00% | 0.00% |
| Japonica Intermediate | 68 | 100.00% | 0.00% |
| Group VI/Aromatic | 14 | 100.00% | 0.00% |
| Intermediate | 41 | 78.05% | 21.95% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0723126895 | A->G | INTERGENIC | None |