Detailed information of SNP:
|
SNP ID:
sf0724063076(Gbrowse)
Chromosome: chr07 Position: 24063076 |
Major allele:
G
Minor allele: A Reference allele: A |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1416 | 58.05% | 41.95% |
| All Indica | 798 | 90.23% | 9.77% |
| All Japonica | 497 | 2.82% | 97.18% |
| Aus | 67 | 91.04% | 8.96% |
| Indica I | 375 | 92.80% | 7.20% |
| Indica II | 213 | 91.55% | 8.45% |
| Indica Intermediate | 210 | 84.29% | 15.71% |
| Temperate Japonica | 335 | 3.28% | 96.72% |
| Tropical Japonica | 94 | 0.00% | 100.00% |
| Japonica Intermediate | 68 | 4.41% | 95.59% |
| Group VI/Aromatic | 14 | 0.00% | 100.00% |
| Intermediate | 40 | 67.50% | 32.50% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0724063076 | A->G | INTERGENIC | None |