Detailed information of SNP:



SNP ID: sf0724166011(Gbrowse)

Chromosome: chr07

Position: 24166011
Major allele: C

Minor allele: T

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of T(minor allele)
All1417 81.86% 18.14%
All Indica798 95.61% 4.39%
All Japonica497 60.76% 39.24%
Aus67 97.01% 2.99%
Indica I374 95.45% 4.55%
Indica II213 94.37% 5.63%
Indica Intermediate211 97.16% 2.84%
Temperate Japonica335 80.00% 20.00%
Tropical Japonica94 18.09% 81.91%
Japonica Intermediate68 25.00% 75.00%
Group VI/Aromatic14 0.00% 100.00%
Intermediate41 73.17% 26.83%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0724166011 C->T INTERGENIC None