Detailed information of SNP:
SNP ID:
sf0724264691(Gbrowse)
Chromosome: chr07 Position: 24264691 |
Major allele:
T
Minor allele: C Reference allele: C |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
Populations | Population Size | Frequency of T(major allele) | Frequency of C(minor allele) |
---|---|---|---|
All | 1418 | 59.59% | 40.41% |
All Indica | 799 | 97.25% | 2.75% |
All Japonica | 497 | 3.82% | 96.18% |
Aus | 67 | 20.90% | 79.10% |
Indica I | 375 | 99.20% | 0.80% |
Indica II | 213 | 92.96% | 7.04% |
Indica Intermediate | 211 | 98.10% | 1.90% |
Temperate Japonica | 335 | 2.39% | 97.61% |
Tropical Japonica | 94 | 4.26% | 95.74% |
Japonica Intermediate | 68 | 10.29% | 89.71% |
Group VI/Aromatic | 14 | 50.00% | 50.00% |
Intermediate | 41 | 68.29% | 31.71% |
Allele Var Effect:
SNP ID | Var | Gene | Effect/Location |
---|---|---|---|
sf0724264691 | C->T | INTERGENIC | None |