Detailed information of SNP:
|
SNP ID:
sf0724464718(Gbrowse)
Chromosome: chr07 Position: 24464718 |
Major allele:
G
Minor allele: A Reference allele: G |
Allele Frequencies:
NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.
| Populations | Population Size | Frequency of G(major allele) | Frequency of A(minor allele) |
|---|---|---|---|
| All | 1398 | 85.48% | 14.52% |
| All Indica | 798 | 99.00% | 1.00% |
| All Japonica | 478 | 75.10% | 24.90% |
| Aus | 66 | 10.61% | 89.39% |
| Indica I | 375 | 99.73% | 0.27% |
| Indica II | 212 | 97.17% | 2.83% |
| Indica Intermediate | 211 | 99.53% | 0.47% |
| Temperate Japonica | 335 | 97.01% | 2.99% |
| Tropical Japonica | 81 | 3.70% | 96.30% |
| Japonica Intermediate | 62 | 50.00% | 50.00% |
| Group VI/Aromatic | 14 | 64.29% | 35.71% |
| Intermediate | 42 | 71.43% | 28.57% |
Allele Var Effect:
| SNP ID | Var | Gene | Effect/Location |
|---|---|---|---|
| sf0724464718 | G->A | INTERGENIC | None |