Detailed information of SNP:



SNP ID: sf0724481528(Gbrowse)

Chromosome: chr07

Position: 24481528
Major allele: C

Minor allele: A

Reference allele: C

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of C(major allele)Frequency of A(minor allele)
All1419 85.41% 14.59%
All Indica799 99.12% 0.88%
All Japonica497 76.86% 23.14%
Aus67 8.96% 91.04%
Indica I375 100.00% 0.00%
Indica II213 97.65% 2.35%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 69.25% 30.75%
Tropical Japonica94 98.94% 1.06%
Japonica Intermediate68 83.82% 16.18%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 76.19% 23.81%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0724481528 C->A INTERGENIC None