Detailed information of SNP:



SNP ID: sf0724486055(Gbrowse)

Chromosome: chr07

Position: 24486055
Major allele: G

Minor allele: C

Reference allele: G

Allele Frequencies:


NOTE: The detailed information of the classification of populations can be found in the "Notes and Data Evaluation" page.


PopulationsPopulation SizeFrequency of G(major allele)Frequency of C(minor allele)
All1417 72.69% 27.31%
All Indica799 98.25% 1.75%
All Japonica495 43.43% 56.57%
Aus67 7.46% 92.54%
Indica I375 100.00% 0.00%
Indica II213 94.37% 5.63%
Indica Intermediate211 99.05% 0.95%
Temperate Japonica335 60.30% 39.70%
Tropical Japonica93 2.15% 97.85%
Japonica Intermediate67 16.42% 83.58%
Group VI/Aromatic14 0.00% 100.00%
Intermediate42 59.52% 40.48%

Allele Var Effect:


SNP ID Var Gene Effect/Location
sf0724486055 G->C INTERGENIC None